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Carolyn Klinge

(she, her, hers)

Professor Term

School of Medicine

Orcid identifier0000-0002-3358-4378
  • Professor Term
    School of Medicine

BIO

My research centers on the molecular mechanisms of estrogen action and on endocrine therapy resistance in breast cancer and liver responses to environmental pollutants and diet that promote metabolic dysfunction-associated steatotic liver disease (MASLD).  I work with breast cancer cell line models and mice to study tissue-specific estrogen, diet, and polychlorinated biphenyls (PCB)-exposure-regulated transcriptome and epitranscriptomic signaling.  I have expertise in cell-based studies on estrogen receptor-DNA interaction, transcriptional regulation of mRNA and non-coding RNAs, e.g., miRNA and lncRNAs and their gene targets, protein expression, lipidomics, nongenomic signaling by estrogens, mechanisms of endocrine disrupting and metabolism disrupting chemicals, Oxford nanopore long read direct RNA- seq – including identification of site-specific m6A in mRNA transcripts, Illumina short read RNA- and miRNA-seq, m6A-RNA-immunoprecipitation (RIP)- RT-qPCR, mass-spectrometry-based detection of RNA modifications, and quantitative bioinformatic data analyses.  In collaboration with Dr. Brian Clem, my lab recently performed single nuclear RNA seq (snRNA-seq, Parse Biosciences) to define the transcriptome changes in human breast cancer patient derived xenograft (PDX) grown in the milk duct of the mammary gland of female mice following the mouse intra-ductal (MIND) model.  In collaboration with Drs. Matthew Cave and Belinda Petri, we are examining how epitranscriptomic changes in mouse liver following exposure to high fat or low fat diet in combination with PCB exposures regulate m6A epitranscriptome changes, splicing, transcript and protein abundance, and pathways, especially lipid metabolism, in a mouse model of MASLD and its progression to metabolic-dysfunction associated steatohepatitis (MASH).

ACADEMIC POSITIONS

  • Professor
    University of Louisville, Biochemistry and Molecular Genetics, Louisville, United States1 Jul 2005
  • Asssociate Professor
    University of Louisville, Biochemistry and Molecular Biology, Louisville, United States1 Jul 2001 - 30 Jun 2005
  • Assistant Professor
    University of Louisville, iochemistry and Molecular Biology, Louisville, United States1 Aug 1996 - 30 Jun 2001
  • Associate Research Professor
    University of Rochester Medical Center, Rochester, United States1 Jan 2025 - 31 Jul 1996
  • Assistant Research Professor
    University of Rochester Medical Center, Biochemistry, Rochester, United States1 Jul 1989 - 31 Dec 1995

DEGREES

  • Ph.D.
    Pennsylvania State University, Hershey, United States1 Jul 1981 - 19 Nov 1984
  • M.S.
    Pennsylvania State University, Hershey, United States1 Aug 1979 - 30 Jun 1981
  • B.A.
    Keuka College, Keuka Park, United States18 Aug 1975 - 3 Jun 1979

CERTIFICATIONS

  • Certificate in Organizational Change in Higher Education
    University of Louisville, Louisville, United States1 Aug 2019 - 30 Aug 2021
  • Certificate in Health Professions Education
    University of Louisville, Louisville, United States1 Aug 2012 - 3 May 2014

POSTGRADUATE TRAINING

  • Post-doctoral fellow
    University of Rochester Medical Center, Biochemistry, Rochester, United States3 Dec 1984 - 30 Jun 1989
    Supervised by Hilf RH